diff --git a/biology/fastq-trim/Makefile b/biology/fastq-trim/Makefile index d183a3c838ba..828e068b28c6 100644 --- a/biology/fastq-trim/Makefile +++ b/biology/fastq-trim/Makefile @@ -1,24 +1,23 @@ PORTNAME= fastq-trim -DISTVERSION= 0.1.1-4 -DISTVERSIONSUFFIX= -g7e3c5ff +DISTVERSION= 0.1.2 CATEGORIES= biology MAINTAINER= jwb@FreeBSD.org COMMENT= Lightening fast sequence read trimmer WWW= https://github.com/outpaddling/Fastq-trim LICENSE= BSD2CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE LIB_DEPENDS= libbiolibc.so:biology/biolibc libxtend.so:devel/libxtend USE_GITHUB= yes GH_ACCOUNT= outpaddling MAKE_ENV= VERSION=${PORTVERSION} pre-build: (cd ${WRKSRC} && ${MAKE} LOCALBASE=${LOCALBASE} depend) .include diff --git a/biology/fastq-trim/distinfo b/biology/fastq-trim/distinfo index e98d9c697d0d..2a1f9a93383f 100644 --- a/biology/fastq-trim/distinfo +++ b/biology/fastq-trim/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1647897438 -SHA256 (outpaddling-fastq-trim-0.1.1-4-g7e3c5ff_GH0.tar.gz) = c2dec668dd1946d62b3f7110d243ac9722af8730dbd3919c1e62e01428af3794 -SIZE (outpaddling-fastq-trim-0.1.1-4-g7e3c5ff_GH0.tar.gz) = 30070 +TIMESTAMP = 1670785537 +SHA256 (outpaddling-fastq-trim-0.1.2_GH0.tar.gz) = 9b265aa6cc410a20479ff60d7fd5aa02c9a89c57624290887df4b9129aa1a70c +SIZE (outpaddling-fastq-trim-0.1.2_GH0.tar.gz) = 29796 diff --git a/biology/fastq-trim/pkg-descr b/biology/fastq-trim/pkg-descr index 0a4ad2c041bd..c15f60867a0a 100644 --- a/biology/fastq-trim/pkg-descr +++ b/biology/fastq-trim/pkg-descr @@ -1,2 +1,6 @@ -Fastq-trim is a lightening fast read trimming tool for QA of DNA and RNA -reads prior to analyses such as RNA-Seq. +Fastq-trim is a lightening fast read trimming tool for QA of +DNA and RNA reads prior to analyses such as RNA-Seq. it runs +in a fraction of the time required by popular trimmers and uses +only a few megabytes of RAM, so it will run almost entirely in +cache. The design supports adding any number of alignment +functions, so it can be easily adapted to any trimming needs.