diff --git a/biology/vcflib/Makefile b/biology/vcflib/Makefile
index 311b78bac7ce..76e01dc75cbb 100644
--- a/biology/vcflib/Makefile
+++ b/biology/vcflib/Makefile
@@ -1,43 +1,44 @@
 PORTNAME=		vcflib
 DISTVERSIONPREFIX=	v
 DISTVERSION=		1.0.6
+PORTREVISION=		1
 CATEGORIES=		biology
 
 MAINTAINER=	jwb@FreeBSD.org
 COMMENT=	C++ library and CLI tools for parsing and manipulating VCF files
 WWW=		https://github.com/vcflib/vcflib
 
 LICENSE=	MIT
 
 BUILD_DEPENDS=	zig>0:lang/zig \
 		pybind11>=0:devel/pybind11
 LIB_DEPENDS=	libhts.so:biology/htslib \
 		libcurl.so:ftp/curl \
 		libwfa2.so:biology/wfa2-lib
 
 USES=		cmake:noninja gmake localbase:ldflags pkgconfig python shebangfix
 USE_GITHUB=	yes
 
 GH_ACCOUNT=	ekg
 GH_TUPLE=	ekg:fastahack:bb33265:fastahack/contrib/fastahack \
 		ekg:filevercmp:df20dcc:filevercmp/contrib/filevercmp \
 		ekg:fsom:56695e1:fsom/contrib/fsom \
 		ekg:intervaltree:aa59377:intervaltree/contrib/intervaltree \
 		edawson:libVCFH:44b6580:libVCFH/contrib/libVCFH \
 		ekg:multichoose:e1f94ae:multichoose/contrib/multichoose \
 		ekg:smithwaterman:2610e25:smithwaterman/contrib/smithwaterman \
 		simd-everywhere:simde-no-tests:9af03cd:simd/src/simde \
 		vcflib:tabixpp:v1.1.2:tabixpp/contrib/tabixpp
 SHEBANG_FILES=	scripts/*
 
 CMAKE_ARGS+=	-DWFA_GITMODULE=OFF -DWFALIB=${LOCALBASE}/lib/libwfa2.so
 
 # Clang and GCC disable sse2 by default on i386, but it's required for vcflib
 CFLAGS_i386=	-msse2
 
 CONFLICTS_INSTALL=	filevercmp libdisorder # include/disorder.h include/filevercmp.h include/pdflib.hpp
 
 post-stage:
 	${MV} ${STAGEDIR}/usr/lib/libzig.a ${STAGEDIR}${PREFIX}/lib
 
 .include <bsd.port.mk>
diff --git a/biology/vcflib/files/patch-CMakeLists.txt b/biology/vcflib/files/patch-CMakeLists.txt
index 5a7824a2dfa0..263e3dbee0f9 100644
--- a/biology/vcflib/files/patch-CMakeLists.txt
+++ b/biology/vcflib/files/patch-CMakeLists.txt
@@ -1,20 +1,20 @@
 --- CMakeLists.txt.orig	2023-01-29 04:57:02 UTC
 +++ CMakeLists.txt
 @@ -9,7 +9,7 @@
  cmake_minimum_required(VERSION 3.16)
  project(vcflib)
  
 -set(CMAKE_CXX_STANDARD 17)
 +set(CMAKE_CXX_STANDARD 14)
  
  include(ExternalProject)
  include(FeatureSummary)
-@@ -38,7 +38,7 @@ option(PROFILING "Enable profiling" OFF)
- option(GPROF "Enable gprof profiling" OFF)
- option(ASAN "Use address sanitiser" OFF)
- option(ZIG "Set to OFF to disable the zig code" ON)
--option(WFA_GITMODULE "Force local git submodule for WFA2LIB" ON) # disable in distros, you may need to add path to WFA_INCLUDE_DIRS
-+option(WFA_GITMODULE "Force local git submodule for WFA2LIB" OFF) # disable in distros, you may need to add path to WFA_INCLUDE_DIRS
+@@ -69,7 +69,7 @@ if(NOT CMAKE_BUILD_TYPE)
+ endif()
+ 
+ if (${CMAKE_BUILD_TYPE} MATCHES Release)
+-  set(EXTRA_FLAGS "-march=native -D_FILE_OFFSET_BITS=64")
++  set(EXTRA_FLAGS "-D_FILE_OFFSET_BITS=64")
+   # set(CMAKE_CXX_FLAGS_RELEASE "-DNDEBUG") # reset CXX_FLAGS to replace -O3 with -Ofast
+ endif()
  
- include(CheckIPOSupported) # adds lto
- check_ipo_supported(RESULT ipo_supported OUTPUT output)