diff --git a/biology/p5-transdecoder/Makefile b/biology/p5-transdecoder/Makefile index 0cb8500f2fbe..cc5ea8d2a42d 100644 --- a/biology/p5-transdecoder/Makefile +++ b/biology/p5-transdecoder/Makefile @@ -1,47 +1,47 @@ PORTNAME= transdecoder DISTVERSIONPREFIX= TransDecoder-v -DISTVERSION= 5.7.0 +DISTVERSION= 5.7.1 CATEGORIES= biology perl5 PKGNAMEPREFIX= p5- MAINTAINER= jwb@FreeBSD.org COMMENT= Identify candidate coding regions within transcript sequences WWW= https://transdecoder.github.io/ LICENSE= BSD3CLAUSE RUN_DEPENDS= cd-hit>=4.6.1:biology/cd-hit \ p5-URI>0:net/p5-URI USES= perl5 shebangfix USE_GITHUB= yes GH_PROJECT= TransDecoder SHEBANG_FILES= sample_data/cufflinks_example/runMe.sh \ sample_data/pasa_example/runMe.sh \ sample_data/simple_transcriptome_target/runMe.sh \ util/pfam_mpi.pbs NO_BUILD= yes NO_ARCH= yes PERL_MOD_DIR= ${PREFIX}/${SITE_PERL_REL}/${PORTNAME} PERL_UTIL_DIR= ${PREFIX}/libexec/${PORTNAME} SCRIPTS= ${WRKSRC}/TransDecoder.LongOrfs \ ${WRKSRC}/TransDecoder.Predict post-patch: @${REINPLACE_CMD} \ -e 's|$$FindBin::RealBin/PerlLib|${PERL_MOD_DIR}|g' \ -e 's|$$FindBin::Bin/../PerlLib|${PERL_MOD_DIR}|g' \ -e 's|$$FindBin::RealBin/util|${PERL_UTIL_DIR}|g' \ ${SCRIPTS} \ ${WRKSRC}/util/*.pl do-install: @${MKDIR} ${STAGEDIR}${PERL_MOD_DIR} ${STAGEDIR}${PERL_UTIL_DIR} ${INSTALL_SCRIPT} ${WRKSRC}/PerlLib/* ${STAGEDIR}${PERL_MOD_DIR} ${INSTALL_SCRIPT} ${SCRIPTS} ${STAGEDIR}${PREFIX}/bin ${INSTALL_SCRIPT} ${WRKSRC}/util/*.pl ${STAGEDIR}${PERL_UTIL_DIR} .include diff --git a/biology/p5-transdecoder/distinfo b/biology/p5-transdecoder/distinfo index ab8472e025e7..c5d717b029ce 100644 --- a/biology/p5-transdecoder/distinfo +++ b/biology/p5-transdecoder/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1675117013 -SHA256 (transdecoder-TransDecoder-TransDecoder-v5.7.0_GH0.tar.gz) = 9804996a27921278bdd4b6679cebc37acb8fb58427de883d0659f2512b3bd792 -SIZE (transdecoder-TransDecoder-TransDecoder-v5.7.0_GH0.tar.gz) = 15755749 +TIMESTAMP = 1691268775 +SHA256 (transdecoder-TransDecoder-TransDecoder-v5.7.1_GH0.tar.gz) = 41dd5e95f6ba946ff21340417d867e5e99f123b4035779b25d3cffd20b828a30 +SIZE (transdecoder-TransDecoder-TransDecoder-v5.7.1_GH0.tar.gz) = 15749916