diff --git a/biology/ngs-sdk/Makefile b/biology/ngs-sdk/Makefile
index d93236ccc6f6..a42c04fe0afa 100644
--- a/biology/ngs-sdk/Makefile
+++ b/biology/ngs-sdk/Makefile
@@ -1,46 +1,46 @@
 PORTNAME=	ngs
-DISTVERSION=	2.11.2
+DISTVERSION=	3.0.1
 CATEGORIES=	biology
 PKGNAMESUFFIX=	-sdk
 
 MAINTAINER=	yuri@FreeBSD.org
 COMMENT=	Tools and libraries for using data in the INSDC Sequence Read Archives
 WWW=		https://github.com/ncbi/ngs
 
 LICENSE=	PD
 LICENSE_FILE=	${WRKSRC}/LICENSE
 
 BROKEN_aarch64=		fails to configure: unsupported architecture 'FreeBSD'
 BROKEN_armv6=		fails to configure: unsupported architecture 'FreeBSD':'arm'
 BROKEN_armv7=		fails to configure: unsupported architecture 'FreeBSD':'arm'
 BROKEN_riscv64=		fails to configure: unsupported architecture 'FreeBSD'
 NOT_FOR_ARCHS=		powerpc64
 NOT_FOR_ARCHS_REASON=	os-arch.prl needs to be taught about powerpc64
 
 USES=		compiler:c++11-lang gmake perl5
 USE_PERL5=	build
 USE_LDCONFIG=	yes
 
 USE_GITHUB=	yes
 GH_ACCOUNT=	ncbi
 
 HAS_CONFIGURE=	yes
 CONFIGURE_ARGS=	--prefix="${STAGEDIR}${PREFIX}" --build-prefix="${WRKSRC}/build"
 
 ALL_TARGET=	ngs-sdk
 
 post-extract:
 	@cd ${WRKSRC}/ngs-sdk/ngs/unix && ${LN} -s x86_64 amd64
 
 do-install: # install target from the project breaks: https://github.com/ncbi/ngs/issues/34
 	# install headers
 	cd ${WRKSRC}/ngs-sdk && ${COPYTREE_SHARE} ngs ${STAGEDIR}${PREFIX}/include
 	${RM} -r ${STAGEDIR}${PREFIX}/include/ngs/win
 	# install libraries
 	cd ${WRKSRC}/build/ngs-sdk/FreeBSD/clang/${ARCH}/rel/lib && ${COPYTREE_SHARE} . ${STAGEDIR}${PREFIX}/lib
 		# The above command installs broken-looking static libs with symlinks.
 		# This is intentional, see comments https://github.com/ncbi/ncbi-vdb/issues/36#issuecomment-817990790 This may change in future versions.
 	# strip
-	${STRIP_CMD} ${STAGEDIR}${PREFIX}/lib/libngs-sdk.so.${DISTVERSION}
+	${STRIP_CMD} ${STAGEDIR}${PREFIX}/lib/libngs-sdk.so.2.11.2
 
 .include <bsd.port.mk>
diff --git a/biology/ngs-sdk/distinfo b/biology/ngs-sdk/distinfo
index 922f4ad62f65..d469194b424e 100644
--- a/biology/ngs-sdk/distinfo
+++ b/biology/ngs-sdk/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1643246050
-SHA256 (ncbi-ngs-2.11.2_GH0.tar.gz) = 7555ab7c2f04bd81160859f6c85c65376dc7f7b891804fad9e7636a7788e39c2
-SIZE (ncbi-ngs-2.11.2_GH0.tar.gz) = 1101119
+TIMESTAMP = 1687816957
+SHA256 (ncbi-ngs-3.0.1_GH0.tar.gz) = 0c326aa1744a689c67d2ee7ef8097ec962fdc1529ddbfd63eb0987a23e76d48e
+SIZE (ncbi-ngs-3.0.1_GH0.tar.gz) = 1101663