diff --git a/science/gemmi/Makefile b/science/gemmi/Makefile index 18f0c34d2ae4..d7c8acf02019 100644 --- a/science/gemmi/Makefile +++ b/science/gemmi/Makefile @@ -1,26 +1,27 @@ PORTNAME= gemmi DISTVERSIONPREFIX= v -DISTVERSION= 0.5.8 +DISTVERSION= 0.6.0 CATEGORIES= science # chemistry MAINTAINER= yuri@FreeBSD.org COMMENT= Macromolecular crystallography library and utilities WWW= https://gemmi.readthedocs.io/en/latest/ LICENSE= MPL20 LICENSE_FILE= ${WRKSRC}/LICENSE.txt USES= cmake:testing compiler:c++17-lang # tests don't run, see https://github.com/project-gemmi/gemmi/issues/231 USE_GITHUB= yes GH_ACCOUNT= project-gemmi +CMAKE_ON= BUILD_SHARED_LIBS CMAKE_TESTING_TARGET= check OPTIONS_DEFINE= FORTRAN FORTRAN_USES= fortran FORTRAN_CMAKE_BOOL= USE_FORTRAN FORTRAN_BROKEN= project option doesn't do anything, see https://github.com/project-gemmi/gemmi/issues/232 .include diff --git a/science/gemmi/distinfo b/science/gemmi/distinfo index ac2fb5d3d8f5..51fc30631c42 100644 --- a/science/gemmi/distinfo +++ b/science/gemmi/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1671963605 -SHA256 (project-gemmi-gemmi-v0.5.8_GH0.tar.gz) = b67c8f79d85c4fd6766ce5b0418c79f4cb54a62d9091de6d0a7c20bb6060070e -SIZE (project-gemmi-gemmi-v0.5.8_GH0.tar.gz) = 1695293 +TIMESTAMP = 1678123316 +SHA256 (project-gemmi-gemmi-v0.6.0_GH0.tar.gz) = 5f033dded4bf1f3d8fa88636d798aea70bfb2a2f0e209fd517b36d773f83588d +SIZE (project-gemmi-gemmi-v0.6.0_GH0.tar.gz) = 1737083 diff --git a/science/gemmi/pkg-plist b/science/gemmi/pkg-plist index 369eb6e118c3..5cf31def8fae 100644 --- a/science/gemmi/pkg-plist +++ b/science/gemmi/pkg-plist @@ -1,231 +1,239 @@ bin/gemmi include/gemmi/addends.hpp include/gemmi/align.hpp include/gemmi/assembly.hpp include/gemmi/asudata.hpp include/gemmi/asumask.hpp include/gemmi/atof.hpp include/gemmi/atox.hpp include/gemmi/bessel.hpp include/gemmi/binner.hpp include/gemmi/blob.hpp include/gemmi/c4322.hpp include/gemmi/calculate.hpp include/gemmi/ccp4.hpp include/gemmi/cellred.hpp include/gemmi/chemcomp.hpp include/gemmi/chemcomp_xyz.hpp include/gemmi/cif.hpp include/gemmi/cif2mtz.hpp include/gemmi/cifdoc.hpp include/gemmi/contact.hpp include/gemmi/crd.hpp include/gemmi/dencalc.hpp include/gemmi/dirwalk.hpp include/gemmi/eig3.hpp include/gemmi/elem.hpp include/gemmi/enumstr.hpp include/gemmi/fail.hpp include/gemmi/fileutil.hpp include/gemmi/floodfill.hpp include/gemmi/formfact.hpp include/gemmi/fourier.hpp include/gemmi/fprime.hpp include/gemmi/fstream.hpp include/gemmi/grid.hpp include/gemmi/gz.hpp include/gemmi/input.hpp include/gemmi/interop.hpp include/gemmi/it92.hpp include/gemmi/iterator.hpp include/gemmi/json.hpp include/gemmi/levmar.hpp include/gemmi/linkhunt.hpp include/gemmi/math.hpp include/gemmi/merge.hpp include/gemmi/metadata.hpp include/gemmi/mmcif.hpp include/gemmi/mmcif_impl.hpp include/gemmi/mmdb.hpp include/gemmi/mmread.hpp +include/gemmi/mmread_gz.hpp include/gemmi/model.hpp include/gemmi/modify.hpp include/gemmi/monlib.hpp include/gemmi/mtz.hpp include/gemmi/mtz2cif.hpp include/gemmi/neighbor.hpp include/gemmi/neutron92.hpp include/gemmi/numb.hpp include/gemmi/pdb.hpp include/gemmi/pirfasta.hpp -include/gemmi/placeh.hpp include/gemmi/polyheur.hpp include/gemmi/qcp.hpp include/gemmi/read_cif.hpp -include/gemmi/read_coor.hpp include/gemmi/read_map.hpp include/gemmi/recgrid.hpp include/gemmi/reciproc.hpp +include/gemmi/refine/geom.hpp +include/gemmi/refine/ll.hpp include/gemmi/refln.hpp include/gemmi/reindex.hpp include/gemmi/remarks.hpp include/gemmi/resinfo.hpp +include/gemmi/riding_h.hpp include/gemmi/scaling.hpp include/gemmi/select.hpp include/gemmi/seqalign.hpp include/gemmi/seqid.hpp include/gemmi/sfcalc.hpp include/gemmi/small.hpp include/gemmi/smcif.hpp include/gemmi/solmask.hpp include/gemmi/span.hpp include/gemmi/sprintf.hpp +include/gemmi/stats.hpp include/gemmi/symmetry.hpp include/gemmi/third_party/fast_float.h include/gemmi/third_party/pocketfft_hdronly.h include/gemmi/third_party/sajson.h include/gemmi/third_party/stb_sprintf.h include/gemmi/third_party/tao/LICENSE include/gemmi/third_party/tao/NOTES include/gemmi/third_party/tao/pegtl.hpp include/gemmi/third_party/tao/pegtl/analysis/analyze_cycles.hpp include/gemmi/third_party/tao/pegtl/analysis/counted.hpp include/gemmi/third_party/tao/pegtl/analysis/generic.hpp include/gemmi/third_party/tao/pegtl/analysis/grammar_info.hpp include/gemmi/third_party/tao/pegtl/analysis/insert_guard.hpp include/gemmi/third_party/tao/pegtl/analysis/insert_rules.hpp include/gemmi/third_party/tao/pegtl/analysis/rule_info.hpp include/gemmi/third_party/tao/pegtl/analysis/rule_type.hpp include/gemmi/third_party/tao/pegtl/analyze.hpp include/gemmi/third_party/tao/pegtl/apply_mode.hpp include/gemmi/third_party/tao/pegtl/argv_input.hpp include/gemmi/third_party/tao/pegtl/ascii.hpp include/gemmi/third_party/tao/pegtl/buffer_input.hpp include/gemmi/third_party/tao/pegtl/config.hpp include/gemmi/third_party/tao/pegtl/cstream_input.hpp include/gemmi/third_party/tao/pegtl/eol.hpp include/gemmi/third_party/tao/pegtl/eol_pair.hpp include/gemmi/third_party/tao/pegtl/file_input.hpp include/gemmi/third_party/tao/pegtl/input_error.hpp include/gemmi/third_party/tao/pegtl/internal/action.hpp include/gemmi/third_party/tao/pegtl/internal/action_input.hpp include/gemmi/third_party/tao/pegtl/internal/alnum.hpp include/gemmi/third_party/tao/pegtl/internal/alpha.hpp include/gemmi/third_party/tao/pegtl/internal/any.hpp include/gemmi/third_party/tao/pegtl/internal/apply.hpp include/gemmi/third_party/tao/pegtl/internal/apply0.hpp include/gemmi/third_party/tao/pegtl/internal/apply0_single.hpp include/gemmi/third_party/tao/pegtl/internal/apply_single.hpp include/gemmi/third_party/tao/pegtl/internal/at.hpp include/gemmi/third_party/tao/pegtl/internal/bof.hpp include/gemmi/third_party/tao/pegtl/internal/bol.hpp include/gemmi/third_party/tao/pegtl/internal/bump_help.hpp include/gemmi/third_party/tao/pegtl/internal/bump_impl.hpp include/gemmi/third_party/tao/pegtl/internal/bytes.hpp include/gemmi/third_party/tao/pegtl/internal/control.hpp include/gemmi/third_party/tao/pegtl/internal/cr_crlf_eol.hpp include/gemmi/third_party/tao/pegtl/internal/cr_eol.hpp include/gemmi/third_party/tao/pegtl/internal/crlf_eol.hpp include/gemmi/third_party/tao/pegtl/internal/cstream_reader.hpp include/gemmi/third_party/tao/pegtl/internal/cstring_reader.hpp include/gemmi/third_party/tao/pegtl/internal/demangle.hpp include/gemmi/third_party/tao/pegtl/internal/demangle_cxxabi.hpp include/gemmi/third_party/tao/pegtl/internal/demangle_nop.hpp include/gemmi/third_party/tao/pegtl/internal/demangle_sanitise.hpp include/gemmi/third_party/tao/pegtl/internal/disable.hpp include/gemmi/third_party/tao/pegtl/internal/discard.hpp include/gemmi/third_party/tao/pegtl/internal/dusel_mode.hpp include/gemmi/third_party/tao/pegtl/internal/duseltronik.hpp include/gemmi/third_party/tao/pegtl/internal/enable.hpp include/gemmi/third_party/tao/pegtl/internal/endian.hpp include/gemmi/third_party/tao/pegtl/internal/endian_gcc.hpp include/gemmi/third_party/tao/pegtl/internal/endian_win.hpp include/gemmi/third_party/tao/pegtl/internal/eof.hpp include/gemmi/third_party/tao/pegtl/internal/eol.hpp include/gemmi/third_party/tao/pegtl/internal/eolf.hpp include/gemmi/third_party/tao/pegtl/internal/file_mapper.hpp include/gemmi/third_party/tao/pegtl/internal/file_opener.hpp include/gemmi/third_party/tao/pegtl/internal/file_reader.hpp include/gemmi/third_party/tao/pegtl/internal/has_apply.hpp include/gemmi/third_party/tao/pegtl/internal/has_apply0.hpp include/gemmi/third_party/tao/pegtl/internal/identifier.hpp include/gemmi/third_party/tao/pegtl/internal/if_apply.hpp include/gemmi/third_party/tao/pegtl/internal/if_must.hpp include/gemmi/third_party/tao/pegtl/internal/if_must_else.hpp include/gemmi/third_party/tao/pegtl/internal/if_then_else.hpp include/gemmi/third_party/tao/pegtl/internal/input_pair.hpp include/gemmi/third_party/tao/pegtl/internal/integer_sequence.hpp include/gemmi/third_party/tao/pegtl/internal/istream_reader.hpp include/gemmi/third_party/tao/pegtl/internal/istring.hpp include/gemmi/third_party/tao/pegtl/internal/iterator.hpp include/gemmi/third_party/tao/pegtl/internal/lf_crlf_eol.hpp include/gemmi/third_party/tao/pegtl/internal/lf_eol.hpp include/gemmi/third_party/tao/pegtl/internal/list.hpp include/gemmi/third_party/tao/pegtl/internal/list_must.hpp include/gemmi/third_party/tao/pegtl/internal/list_tail.hpp include/gemmi/third_party/tao/pegtl/internal/list_tail_pad.hpp include/gemmi/third_party/tao/pegtl/internal/marker.hpp include/gemmi/third_party/tao/pegtl/internal/minus.hpp include/gemmi/third_party/tao/pegtl/internal/must.hpp include/gemmi/third_party/tao/pegtl/internal/not_at.hpp include/gemmi/third_party/tao/pegtl/internal/one.hpp include/gemmi/third_party/tao/pegtl/internal/opt.hpp include/gemmi/third_party/tao/pegtl/internal/pad.hpp include/gemmi/third_party/tao/pegtl/internal/pad_opt.hpp include/gemmi/third_party/tao/pegtl/internal/peek_char.hpp include/gemmi/third_party/tao/pegtl/internal/peek_utf16.hpp include/gemmi/third_party/tao/pegtl/internal/peek_utf32.hpp include/gemmi/third_party/tao/pegtl/internal/peek_utf8.hpp include/gemmi/third_party/tao/pegtl/internal/pegtl_string.hpp include/gemmi/third_party/tao/pegtl/internal/plus.hpp include/gemmi/third_party/tao/pegtl/internal/raise.hpp include/gemmi/third_party/tao/pegtl/internal/range.hpp include/gemmi/third_party/tao/pegtl/internal/ranges.hpp include/gemmi/third_party/tao/pegtl/internal/rep.hpp include/gemmi/third_party/tao/pegtl/internal/rep_min.hpp include/gemmi/third_party/tao/pegtl/internal/rep_min_max.hpp include/gemmi/third_party/tao/pegtl/internal/rep_opt.hpp include/gemmi/third_party/tao/pegtl/internal/require.hpp include/gemmi/third_party/tao/pegtl/internal/result_on_found.hpp include/gemmi/third_party/tao/pegtl/internal/rule_conjunction.hpp include/gemmi/third_party/tao/pegtl/internal/rules.hpp include/gemmi/third_party/tao/pegtl/internal/seq.hpp include/gemmi/third_party/tao/pegtl/internal/skip_control.hpp include/gemmi/third_party/tao/pegtl/internal/sor.hpp include/gemmi/third_party/tao/pegtl/internal/star.hpp include/gemmi/third_party/tao/pegtl/internal/star_must.hpp include/gemmi/third_party/tao/pegtl/internal/state.hpp include/gemmi/third_party/tao/pegtl/internal/string.hpp include/gemmi/third_party/tao/pegtl/internal/trivial.hpp include/gemmi/third_party/tao/pegtl/internal/try_catch_type.hpp include/gemmi/third_party/tao/pegtl/internal/until.hpp include/gemmi/third_party/tao/pegtl/istream_input.hpp include/gemmi/third_party/tao/pegtl/memory_input.hpp include/gemmi/third_party/tao/pegtl/mmap_input.hpp include/gemmi/third_party/tao/pegtl/normal.hpp include/gemmi/third_party/tao/pegtl/nothing.hpp include/gemmi/third_party/tao/pegtl/parse.hpp include/gemmi/third_party/tao/pegtl/parse_error.hpp include/gemmi/third_party/tao/pegtl/position.hpp include/gemmi/third_party/tao/pegtl/read_input.hpp include/gemmi/third_party/tao/pegtl/rewind_mode.hpp include/gemmi/third_party/tao/pegtl/rules.hpp include/gemmi/third_party/tao/pegtl/string_input.hpp include/gemmi/third_party/tao/pegtl/tracking_mode.hpp include/gemmi/third_party/tao/pegtl/utf16.hpp include/gemmi/third_party/tao/pegtl/utf32.hpp include/gemmi/third_party/tao/pegtl/utf8.hpp include/gemmi/third_party/tao/pegtl/version.hpp include/gemmi/third_party/tinydir.h include/gemmi/to_chemcomp.hpp include/gemmi/to_cif.hpp include/gemmi/to_json.hpp include/gemmi/to_mmcif.hpp include/gemmi/to_pdb.hpp include/gemmi/topo.hpp include/gemmi/twin.hpp include/gemmi/unitcell.hpp include/gemmi/utf.hpp include/gemmi/util.hpp include/gemmi/version.hpp include/gemmi/xds_ascii.hpp +lib/cmake/gemmi/gemmi-config-version.cmake +lib/cmake/gemmi/gemmi-config.cmake +lib/cmake/gemmi/gemmi-targets-%%CMAKE_BUILD_TYPE%%.cmake +lib/cmake/gemmi/gemmi-targets.cmake +lib/libgemmi_cpp.so