diff --git a/science/Makefile b/science/Makefile index df34c6dbc9e0..da29a39c2615 100644 --- a/science/Makefile +++ b/science/Makefile @@ -1,524 +1,525 @@ COMMENT = Scientific ports SUBDIR += 2d-rewriter SUBDIR += ALPSCore SUBDIR += ChipmunkPhysics SUBDIR += InsightToolkit SUBDIR += InsightToolkit501 SUBDIR += PETSc SUBDIR += R-cran-DCluster SUBDIR += R-cran-Epi SUBDIR += R-cran-FAdist SUBDIR += R-cran-bayesm SUBDIR += R-cran-cmprsk SUBDIR += R-cran-e1071 SUBDIR += R-cran-eco SUBDIR += R-cran-epicalc SUBDIR += R-cran-etm SUBDIR += R-cran-fastICA SUBDIR += R-cran-kernlab SUBDIR += R-cran-ks SUBDIR += R-cran-snow SUBDIR += R-cran-som SUBDIR += R-cran-udunits2 SUBDIR += abinit + SUBDIR += acados SUBDIR += afni SUBDIR += agrum SUBDIR += aircraft-datcom SUBDIR += antioch SUBDIR += apbs SUBDIR += arbor SUBDIR += ascent SUBDIR += atompaw SUBDIR += avogadro2 SUBDIR += avogadrolibs SUBDIR += axom SUBDIR += bagel SUBDIR += bddsolve SUBDIR += berkeleygw SUBDIR += bodr SUBDIR += bout++ SUBDIR += bout++-merging-filaments SUBDIR += buddy SUBDIR += cantera SUBDIR += cardioid SUBDIR += cdf SUBDIR += cdk SUBDIR += cdo SUBDIR += cgnslib SUBDIR += cgribex SUBDIR += checkmol SUBDIR += chemical-mime-data SUBDIR += chemicalfun SUBDIR += chemps2 SUBDIR += chemtool SUBDIR += chemtool-devel SUBDIR += chimes-calculator SUBDIR += chrono SUBDIR += cif-tools SUBDIR += clhep SUBDIR += clipper SUBDIR += code_saturne SUBDIR += colt SUBDIR += conduit SUBDIR += coordgenlibs SUBDIR += cp2k SUBDIR += cp2k-data SUBDIR += csvtk SUBDIR += dakota SUBDIR += dalton SUBDIR += dd_package SUBDIR += devisor SUBDIR += dftbplus SUBDIR += dftd3 SUBDIR += dftd4 SUBDIR += dimod SUBDIR += dirac SUBDIR += dkh SUBDIR += dlib-cpp SUBDIR += drawxtl SUBDIR += dssp SUBDIR += dvc SUBDIR += dwave-preprocessing SUBDIR += dynare SUBDIR += eccodes SUBDIR += elk SUBDIR += elmerfem SUBDIR += epte SUBDIR += erd SUBDIR += ergo SUBDIR += erkale SUBDIR += erkale-pseudopotentials SUBDIR += fastcap SUBDIR += fasthenry SUBDIR += fastjet SUBDIR += feff10 SUBDIR += fleur SUBDIR += frontistr SUBDIR += fsom SUBDIR += fvcom SUBDIR += fvcom-mpi SUBDIR += gabedit SUBDIR += gamess-us SUBDIR += gbtolib SUBDIR += gchemutils SUBDIR += gcp SUBDIR += gdma SUBDIR += geant4 SUBDIR += gemmi SUBDIR += getdp SUBDIR += ghemical SUBDIR += ghmm SUBDIR += gnudatalanguage SUBDIR += gpaw-setups SUBDIR += gramps SUBDIR += gromacs SUBDIR += gsmc SUBDIR += gtamsanalyzer SUBDIR += h5utils SUBDIR += h5z-zfp SUBDIR += harminv SUBDIR += hdf SUBDIR += hdf5 SUBDIR += hdf5-110 SUBDIR += hdf5-18 SUBDIR += healpix SUBDIR += helfem SUBDIR += hepmc3 SUBDIR += highfive SUBDIR += hypre SUBDIR += iboview SUBDIR += isaac-cfd SUBDIR += jdftx SUBDIR += jmol SUBDIR += jstrack SUBDIR += kalzium SUBDIR += kim-api SUBDIR += kplib SUBDIR += kst2 SUBDIR += lammps SUBDIR += lamprop SUBDIR += latte SUBDIR += libaec SUBDIR += libccp4 SUBDIR += libcifpp SUBDIR += libcint SUBDIR += libctl SUBDIR += libecpint SUBDIR += libefp SUBDIR += libgetar SUBDIR += libghemical SUBDIR += libgridxc SUBDIR += libint SUBDIR += libint2 SUBDIR += libint2-psi4 SUBDIR += libkml SUBDIR += liblinear SUBDIR += libmbd SUBDIR += libmsym SUBDIR += libnegf SUBDIR += liboglappth SUBDIR += libpsml SUBDIR += libquantum SUBDIR += libssm SUBDIR += libsvm SUBDIR += libsvm-python SUBDIR += libvdwxc SUBDIR += libxc SUBDIR += liggghts SUBDIR += linearelasticity SUBDIR += linux-zotero SUBDIR += luscus SUBDIR += m-aneos SUBDIR += madness SUBDIR += maeparser SUBDIR += massxpert SUBDIR += mbdyn SUBDIR += mcpl SUBDIR += mcstas SUBDIR += mcstas-comps SUBDIR += mctc-lib SUBDIR += mcxtrace SUBDIR += mcxtrace-comps SUBDIR += mdynamix SUBDIR += medit SUBDIR += meep SUBDIR += metaphysicl SUBDIR += minc2 SUBDIR += mmdb2 SUBDIR += mmg SUBDIR += mmtf-cpp SUBDIR += mol2ps SUBDIR += molgif SUBDIR += molscript SUBDIR += molsketch SUBDIR += mopac SUBDIR += mp2d SUBDIR += mpb SUBDIR += mpqc SUBDIR += mrchem SUBDIR += mrcpp SUBDIR += msms SUBDIR += mstore SUBDIR += multicharge SUBDIR += multiwfn SUBDIR += mutationpp SUBDIR += namd SUBDIR += ncrystal SUBDIR += nest SUBDIR += netcdf SUBDIR += netcdf-cxx SUBDIR += netcdf-fortran SUBDIR += nifticlib SUBDIR += nlcglib SUBDIR += nwchem SUBDIR += nwchem-data SUBDIR += ocean SUBDIR += octopus SUBDIR += openbabel SUBDIR += openems SUBDIR += openkim-models SUBDIR += openmc SUBDIR += openmodelica SUBDIR += openmolcas SUBDIR += openmx SUBDIR += opensim-core SUBDIR += opensph SUBDIR += opsin SUBDIR += optench SUBDIR += orthanc SUBDIR += orthanc-dicomweb SUBDIR += orthanc-mysql SUBDIR += orthanc-postgresql SUBDIR += orthanc-webviewer SUBDIR += p5-Chemistry-3DBuilder SUBDIR += p5-Chemistry-Bond-Find SUBDIR += p5-Chemistry-Canonicalize SUBDIR += p5-Chemistry-Elements SUBDIR += p5-Chemistry-File-MDLMol SUBDIR += p5-Chemistry-File-Mopac SUBDIR += p5-Chemistry-File-PDB SUBDIR += p5-Chemistry-File-SLN SUBDIR += p5-Chemistry-File-SMARTS SUBDIR += p5-Chemistry-File-SMILES SUBDIR += p5-Chemistry-File-VRML SUBDIR += p5-Chemistry-File-XYZ SUBDIR += p5-Chemistry-FormulaPattern SUBDIR += p5-Chemistry-InternalCoords SUBDIR += p5-Chemistry-Isotope SUBDIR += p5-Chemistry-MacroMol SUBDIR += p5-Chemistry-MidasPattern SUBDIR += p5-Chemistry-Mok SUBDIR += p5-Chemistry-Mol SUBDIR += p5-Chemistry-Pattern SUBDIR += p5-Chemistry-Reaction SUBDIR += p5-Chemistry-Ring SUBDIR += p5-Geo-BUFR SUBDIR += p5-Geo-Calc SUBDIR += p5-Geo-Coordinates-Converter SUBDIR += p5-Geo-Coordinates-Converter-iArea SUBDIR += p5-Geo-Coordinates-Transform SUBDIR += p5-Geo-WebService-Elevation-USGS SUBDIR += p5-Mcstas-Tools SUBDIR += p5-PerlMol SUBDIR += p5-Physics-Unit SUBDIR += packmol SUBDIR += pagmo2 SUBDIR += paje SUBDIR += paraview SUBDIR += parthenon SUBDIR += pastix SUBDIR += pcmsolver SUBDIR += phonopy SUBDIR += plumed SUBDIR += pnetcdf SUBDIR += polytope SUBDIR += precice SUBDIR += psi4 SUBDIR += pulseview SUBDIR += py-DendroPy SUBDIR += py-GPy SUBDIR += py-GPyOpt SUBDIR += py-HepMC3 SUBDIR += py-HofstadterTools SUBDIR += py-MDAnalysis SUBDIR += py-MDAnalysisTests SUBDIR += py-OpenFermion SUBDIR += py-OpenFermion-Dirac SUBDIR += py-OpenFermion-PySCF SUBDIR += py-OpenMC SUBDIR += py-PubChemPy SUBDIR += py-PyFR SUBDIR += py-PyNE SUBDIR += py-SimpleSpectral SUBDIR += py-abipy SUBDIR += py-access SUBDIR += py-arbor SUBDIR += py-arch SUBDIR += py-asap3 SUBDIR += py-asdf SUBDIR += py-asdf-standard SUBDIR += py-asdf-transform-schemas SUBDIR += py-ase SUBDIR += py-atomium SUBDIR += py-avogadrolibs SUBDIR += py-boutdata SUBDIR += py-boututils SUBDIR += py-cdo SUBDIR += py-cfgrib SUBDIR += py-chainer SUBDIR += py-chainer-chemistry SUBDIR += py-chempy SUBDIR += py-cirq-aqt SUBDIR += py-cirq-core SUBDIR += py-cirq-google SUBDIR += py-cirq-ionq SUBDIR += py-cirq-pasqal SUBDIR += py-cirq-rigetti SUBDIR += py-coards SUBDIR += py-dftbplus SUBDIR += py-dftd4 SUBDIR += py-dimod SUBDIR += py-dipy SUBDIR += py-dlib SUBDIR += py-dwave-cloud-client SUBDIR += py-dwave-greedy SUBDIR += py-dwave-hybrid SUBDIR += py-dwave-inspector SUBDIR += py-dwave-neal SUBDIR += py-dwave-networkx SUBDIR += py-dwave-ocean-sdk SUBDIR += py-dwave-optimization SUBDIR += py-dwave-preprocessing SUBDIR += py-dwave-samplers SUBDIR += py-dwave-system SUBDIR += py-dwave-tabu SUBDIR += py-dwavebinarycsp SUBDIR += py-earthpy SUBDIR += py-eccodes SUBDIR += py-emmet-core SUBDIR += py-esda SUBDIR += py-fresnel SUBDIR += py-gemmi SUBDIR += py-geolinks SUBDIR += py-geomet SUBDIR += py-geometer SUBDIR += py-geometric SUBDIR += py-gpaw SUBDIR += py-gsd SUBDIR += py-h5json SUBDIR += py-h5py SUBDIR += py-h5pyd SUBDIR += py-hiphive SUBDIR += py-hoomd-blue SUBDIR += py-inequality SUBDIR += py-ipygany SUBDIR += py-jupyter_jsmol SUBDIR += py-kim-query SUBDIR += py-kimpy SUBDIR += py-kinematics SUBDIR += py-kliff SUBDIR += py-kpLib SUBDIR += py-liac-arff SUBDIR += py-libgetar SUBDIR += py-libpysal SUBDIR += py-lifelines SUBDIR += py-mdp SUBDIR += py-mercantile SUBDIR += py-meshio SUBDIR += py-mmcif SUBDIR += py-mmtf-python SUBDIR += py-molmod SUBDIR += py-moltemplate SUBDIR += py-mp-api SUBDIR += py-mpcontribs-client SUBDIR += py-mplhep SUBDIR += py-mplhep-data SUBDIR += py-mrchem SUBDIR += py-ncrystal SUBDIR += py-netCDF4 SUBDIR += py-netcdf-flattener SUBDIR += py-nglview SUBDIR += py-nibabel SUBDIR += py-obspy SUBDIR += py-oddt SUBDIR += py-openEMS SUBDIR += py-openbabel SUBDIR += py-openpiv SUBDIR += py-optking SUBDIR += py-paida SUBDIR += py-paramz SUBDIR += py-penaltymodel SUBDIR += py-periodictable SUBDIR += py-phono3py SUBDIR += py-phonopy SUBDIR += py-pupynere SUBDIR += py-py3Dmol SUBDIR += py-pyaixi SUBDIR += py-pyberny SUBDIR += py-pycsw SUBDIR += py-pydicom SUBDIR += py-pygeodesy SUBDIR += py-pygeometa SUBDIR += py-pygmo2 SUBDIR += py-pyked SUBDIR += py-pymatgen SUBDIR += py-pymatgen-analysis-alloys SUBDIR += py-pymbd SUBDIR += py-pymol SUBDIR += py-pyosf SUBDIR += py-pyphot SUBDIR += py-pyprecice SUBDIR += py-pyqubo SUBDIR += py-pysal SUBDIR += py-pyscf SUBDIR += py-pyteomics SUBDIR += py-qcelemental SUBDIR += py-qcengine SUBDIR += py-qspin SUBDIR += py-quantities SUBDIR += py-rmf SUBDIR += py-rmsd SUBDIR += py-ruffus SUBDIR += py-sarpy SUBDIR += py-scikit-fuzzy SUBDIR += py-scikit-learn SUBDIR += py-scikit-optimize SUBDIR += py-scikit-sparse SUBDIR += py-scimath SUBDIR += py-scipy SUBDIR += py-scoria SUBDIR += py-sdf SUBDIR += py-segregation SUBDIR += py-segyio SUBDIR += py-signac SUBDIR += py-sklearn-pandas SUBDIR += py-skrebate SUBDIR += py-spaghetti SUBDIR += py-spglib SUBDIR += py-symfc SUBDIR += py-tensorflow SUBDIR += py-thewalrus SUBDIR += py-tobler SUBDIR += py-trainstation SUBDIR += py-trx-python SUBDIR += py-tweedledum SUBDIR += py-vedo SUBDIR += py-veusz SUBDIR += py-xbout SUBDIR += pybrain SUBDIR += pynn SUBDIR += q SUBDIR += qbox SUBDIR += qcl SUBDIR += qiskit-aer SUBDIR += qmcpack SUBDIR += qt6-quick3dphysics SUBDIR += quantum-espresso SUBDIR += quantum-espresso-pseudopotentials SUBDIR += quantum-jet SUBDIR += qwalk SUBDIR += rdkit SUBDIR += rmf SUBDIR += rubygem-ai4r SUBDIR += rubygem-cdo SUBDIR += rubygem-rgeo SUBDIR += rubygem-rgeo-geojson SUBDIR += rubygem-rgeo-proj4 SUBDIR += rubygem-rgeo-shapefile SUBDIR += rubygem-ruby-netcdf SUBDIR += salome-configuration SUBDIR += salome-kernel SUBDIR += scidavis SUBDIR += sciplot SUBDIR += seacas SUBDIR += segyio SUBDIR += serac SUBDIR += shelxle SUBDIR += siconos SUBDIR += siesta SUBDIR += sigrok-cli SUBDIR += sigrok-firmware SUBDIR += sigrok-firmware-fx2lafw SUBDIR += sigrok-firmware-utils SUBDIR += silo SUBDIR += simbody SUBDIR += simgrid SUBDIR += simint SUBDIR += simlib SUBDIR += simple-dftd3 SUBDIR += simsmith SUBDIR += sirius SUBDIR += smoldyn SUBDIR += sparta SUBDIR += spglib SUBDIR += spheral SUBDIR += step SUBDIR += tblite SUBDIR += teem SUBDIR += tfel SUBDIR += tfel-edf SUBDIR += thermofun SUBDIR += tinker SUBDIR += trilinos SUBDIR += ttk SUBDIR += tweedledum SUBDIR += udunits SUBDIR += ukrmol+ SUBDIR += v_sim SUBDIR += vipster SUBDIR += vmd SUBDIR += voro++ SUBDIR += votca SUBDIR += wannier90 SUBDIR += wwplot SUBDIR += wxmacmolplt SUBDIR += xcfun SUBDIR += xcrysden SUBDIR += xdrawchem SUBDIR += xtb SUBDIR += yoda SUBDIR += zotero SUBDIR += zx .include diff --git a/science/acados/Makefile b/science/acados/Makefile new file mode 100644 index 000000000000..b3d432daf26f --- /dev/null +++ b/science/acados/Makefile @@ -0,0 +1,44 @@ +PORTNAME= acados +DISTVERSIONPREFIX= v +DISTVERSION= 0.4.3 +CATEGORIES= science + +MAINTAINER= yuri@FreeBSD.org +COMMENT= Fast and embedded solvers for nonlinear optimal control +WWW= https://github.com/acados/acados + +LICENSE= BSD2CLAUSE +LICENSE_FILE= ${WRKSRC}/LICENSE + +LIB_DEPENDS= libblasfeo.so:math/blasfeo \ + libhpipm.so:math/hpipm + # math/casadi should be a dependency, but somehow cmake doesn't look for it + +USES= cmake:testing localbase:ldflags +USE_GITHUB= yes +USE_LDCONFIG= yes + +OPTIONS_DEFINE= OSQP +OPTIONS_DEFAULT= OSQP + +OSQP_DESC= Build with OSQP solver +OSQP_CMAKE_BOOL= ACADOS_WITH_OSQP +OSQP_LIB_DEPENDS= libosqp.so:math/osqp + +QPOASES_DESC= Build with QPOASES solver +QPOASES_CMAKE_BOOL= ACADOS_WITH_QPOASES +QPOASES_LIB_DEPENDS= libqpOASES.so:math/qposases +QPOASES_BROKEN= error: unknown type name 'namespace' + +post-patch: # workaround for https://github.com/acados/acados/issues/1413 + @${FIND} ${WRKSRC} -name "*.c" -o -name "*.cpp" -o -name "*.h" -o -name "*.hpp" | \ + ${XARGS} ${REINPLACE_CMD} -E 's,"osqp/include/,"osqp/,' + @${FIND} ${WRKSRC} -name "*.c" -o -name "*.cpp" -o -name "*.h" -o -name "*.hpp" | \ + ${XARGS} ${REINPLACE_CMD} \ + -E '\ + s,"(blasfeo|catch|daqp|hpmpc|hpipm)/include/,",; \ + s|qpOASES_e|qpOASES|; \ + s|qpOASES/QProblem.h|qpOASES/QProblem.hpp| \ + ' + +.include diff --git a/science/acados/distinfo b/science/acados/distinfo new file mode 100644 index 000000000000..6a230ad224c1 --- /dev/null +++ b/science/acados/distinfo @@ -0,0 +1,3 @@ +TIMESTAMP = 1736714240 +SHA256 (acados-acados-v0.4.3_GH0.tar.gz) = d0fe5ea1e2cf79fcf0c173d52499277f4b82a116be5fc5b1a2e6cfb987b52c7b +SIZE (acados-acados-v0.4.3_GH0.tar.gz) = 23315087 diff --git a/science/acados/files/patch-CMakeLists.txt b/science/acados/files/patch-CMakeLists.txt new file mode 100644 index 000000000000..cfee60333c63 --- /dev/null +++ b/science/acados/files/patch-CMakeLists.txt @@ -0,0 +1,11 @@ +--- CMakeLists.txt.orig 2025-01-12 20:38:45 UTC ++++ CMakeLists.txt +@@ -267,7 +267,7 @@ add_subdirectory(${PROJECT_SOURCE_DIR}/interfaces/acad + add_subdirectory(${PROJECT_SOURCE_DIR}/interfaces/acados_c) + + # Configure external libraries +-add_subdirectory(${EXTERNAL_SRC_DIR}) ++#add_subdirectory(${EXTERNAL_SRC_DIR}) + + # Configure examples + if(ACADOS_EXAMPLES) diff --git a/science/acados/pkg-descr b/science/acados/pkg-descr new file mode 100644 index 000000000000..fb2e3628bdbf --- /dev/null +++ b/science/acados/pkg-descr @@ -0,0 +1,3 @@ +acados provides fast and embedded solvers for nonlinear optimal control. +It is written in C and offers interfaces to the programming languages Python, +MATLAB and Octave. diff --git a/science/acados/pkg-plist b/science/acados/pkg-plist new file mode 100644 index 000000000000..839a9e613df3 --- /dev/null +++ b/science/acados/pkg-plist @@ -0,0 +1,67 @@ +cmake/FindEigen3.cmake +cmake/FindFortranLibs.cmake +cmake/FindOpenBLAS.cmake +cmake/acadosConfig.cmake +cmake/acadosTargets-%%CMAKE_BUILD_TYPE%%.cmake +cmake/acadosTargets.cmake +include/acados/dense_qp/dense_qp_common.h +include/acados/dense_qp/dense_qp_daqp.h +include/acados/dense_qp/dense_qp_hpipm.h +include/acados/dense_qp/dense_qp_ooqp.h +include/acados/dense_qp/dense_qp_qore.h +include/acados/dense_qp/dense_qp_qpoases.h +include/acados/ocp_nlp/ocp_nlp_common.h +include/acados/ocp_nlp/ocp_nlp_constraints_bgh.h +include/acados/ocp_nlp/ocp_nlp_constraints_bgp.h +include/acados/ocp_nlp/ocp_nlp_constraints_common.h +include/acados/ocp_nlp/ocp_nlp_cost_common.h +include/acados/ocp_nlp/ocp_nlp_cost_conl.h +include/acados/ocp_nlp/ocp_nlp_cost_external.h +include/acados/ocp_nlp/ocp_nlp_cost_ls.h +include/acados/ocp_nlp/ocp_nlp_cost_nls.h +include/acados/ocp_nlp/ocp_nlp_ddp.h +include/acados/ocp_nlp/ocp_nlp_dynamics_common.h +include/acados/ocp_nlp/ocp_nlp_dynamics_cont.h +include/acados/ocp_nlp/ocp_nlp_dynamics_disc.h +include/acados/ocp_nlp/ocp_nlp_globalization_common.h +include/acados/ocp_nlp/ocp_nlp_globalization_fixed_step.h +include/acados/ocp_nlp/ocp_nlp_globalization_funnel.h +include/acados/ocp_nlp/ocp_nlp_globalization_merit_backtracking.h +include/acados/ocp_nlp/ocp_nlp_reg_common.h +include/acados/ocp_nlp/ocp_nlp_reg_convexify.h +include/acados/ocp_nlp/ocp_nlp_reg_mirror.h +include/acados/ocp_nlp/ocp_nlp_reg_noreg.h +include/acados/ocp_nlp/ocp_nlp_reg_project.h +include/acados/ocp_nlp/ocp_nlp_reg_project_reduc_hess.h +include/acados/ocp_nlp/ocp_nlp_sqp.h +include/acados/ocp_nlp/ocp_nlp_sqp_rti.h +include/acados/ocp_qp/ocp_qp_common.h +include/acados/ocp_qp/ocp_qp_common_frontend.h +include/acados/ocp_qp/ocp_qp_full_condensing.h +include/acados/ocp_qp/ocp_qp_hpipm.h +include/acados/ocp_qp/ocp_qp_hpmpc.h +include/acados/ocp_qp/ocp_qp_ooqp.h +include/acados/ocp_qp/ocp_qp_osqp.h +include/acados/ocp_qp/ocp_qp_partial_condensing.h +include/acados/ocp_qp/ocp_qp_qpdunes.h +include/acados/ocp_qp/ocp_qp_xcond_solver.h +include/acados/sim/sim_collocation_utils.h +include/acados/sim/sim_common.h +include/acados/sim/sim_erk_integrator.h +include/acados/sim/sim_gnsf.h +include/acados/sim/sim_irk_integrator.h +include/acados/sim/sim_lifted_irk_integrator.h +include/acados/utils/external_function_generic.h +include/acados/utils/math.h +include/acados/utils/mem.h +include/acados/utils/print.h +include/acados/utils/strsep.h +include/acados/utils/timing.h +include/acados/utils/types.h +include/acados_c/condensing_interface.h +include/acados_c/dense_qp_interface.h +include/acados_c/external_function_interface.h +include/acados_c/ocp_nlp_interface.h +include/acados_c/ocp_qp_interface.h +include/acados_c/sim_interface.h +lib/libacados.so