diff --git a/math/py-fastcluster/Makefile b/math/py-fastcluster/Makefile
index 809129b649e5..bec1457f2a3a 100644
--- a/math/py-fastcluster/Makefile
+++ b/math/py-fastcluster/Makefile
@@ -1,27 +1,27 @@
 PORTNAME=	fastcluster
 PORTVERSION=	1.3.0
-PORTREVISION=	2
+PORTREVISION=	3
 CATEGORIES=	math python
 MASTER_SITES=	PYPI
 PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
 
 MAINTAINER=	sunpoet@FreeBSD.org
 COMMENT=	Fast hierarchical clustering routines for R and Python
 WWW=		http://danifold.net/fastcluster.html \
 		https://github.com/dmuellner/fastcluster
 
 LICENSE=	BSD2CLAUSE
 LICENSE_FILE=	${WRKSRC}/COPYING.txt
 
-BUILD_DEPENDS=	${PYTHON_PKGNAMEPREFIX}numpy>=0,1:math/py-numpy@${PY_FLAVOR} \
+BUILD_DEPENDS=	${PYTHON_PKGNAMEPREFIX}numpy>=2,1:math/py-numpy@${PY_FLAVOR} \
 		${PYTHON_PKGNAMEPREFIX}setuptools>=0:devel/py-setuptools@${PY_FLAVOR} \
 		${PYTHON_PKGNAMEPREFIX}wheel>=0:devel/py-wheel@${PY_FLAVOR}
-RUN_DEPENDS=	${PYTHON_PKGNAMEPREFIX}numpy>=0,1:math/py-numpy@${PY_FLAVOR}
+RUN_DEPENDS=	${PYTHON_PKGNAMEPREFIX}numpy>=2,1:math/py-numpy@${PY_FLAVOR}
 
 USES=		compiler python
 USE_PYTHON=	autoplist concurrent pep517
 
 post-install:
 	${FIND} ${STAGEDIR}${PYTHON_SITELIBDIR} -name '*.so' -exec ${STRIP_CMD} {} +
 
 .include <bsd.port.mk>
diff --git a/math/py-fastcluster/files/patch-pyproject.toml b/math/py-fastcluster/files/patch-pyproject.toml
deleted file mode 100644
index 1b5181373b1a..000000000000
--- a/math/py-fastcluster/files/patch-pyproject.toml
+++ /dev/null
@@ -1,8 +0,0 @@
---- pyproject.toml.orig	2025-05-06 15:48:45 UTC
-+++ pyproject.toml
-@@ -1,4 +1,4 @@ requires = ["setuptools",
- [build-system]
- requires = ["setuptools",
-             "wheel",
--            "numpy >= 2"]
-+            "numpy"]
diff --git a/math/py-fastcluster/files/patch-setup.py b/math/py-fastcluster/files/patch-setup.py
deleted file mode 100644
index 3c5c064a6fcc..000000000000
--- a/math/py-fastcluster/files/patch-setup.py
+++ /dev/null
@@ -1,11 +0,0 @@
---- setup.py.orig	2025-05-06 15:48:45 UTC
-+++ setup.py
-@@ -92,7 +92,7 @@ Clustering Routines for R and Python*, Journal of Stat
-       long_description_content_type='text/markdown',
-       python_requires='>=3',
-       requires=['numpy'],
--      install_requires=["numpy>=2"],
-+      install_requires=["numpy"],
-       provides=['fastcluster'],
-       ext_modules=[Extension('_fastcluster',
-                              ['src/fastcluster_python.cpp'],