diff --git a/biology/jalview/Makefile b/biology/jalview/Makefile
index e9159ecb079b..67bee6fe6514 100644
--- a/biology/jalview/Makefile
+++ b/biology/jalview/Makefile
@@ -1,71 +1,73 @@
 # Created by: Fernan Aguero <fernan@iib.unsam.edu.ar>
 
 PORTNAME=	jalview
 DISTVERSION=	2.11.1.4
 CATEGORIES=	biology java
 MASTER_SITES=	https://www.jalview.org/source/
 DISTNAME=	${PORTNAME}_${DISTVERSION:S/./_/g}
 DISTFILES=	${DISTNAME}${EXTRACT_SUFX}
 EXTRACT_ONLY=	${DISTNAME}${EXTRACT_SUFX}
 
 MAINTAINER=	yuri@FreeBSD.org
 COMMENT=	Viewer and editor for multiple sequence alignments
 
 LICENSE=	GPLv3
 LICENSE_FILE=	${WRKSRC}/LICENSE
 
+BROKEN_FreeBSD_11=	gradle daemon systematically fails on 11: The message received from the daemon indicates that the daemon has disappeared.
+
 BUILD_DEPENDS=	gradle:devel/gradle
 
 USE_JAVA=	yes
 JAVA_VERSION=	11
 
 WRKSRC=		${WRKDIR}/${PORTNAME}
 
 USE_LOCALE=	en_US.UTF-8
 
 DATADIR=	${JAVASHAREDIR}/${PORTNAME}
 SUB_FILES=	jalview.sh
 SUB_LIST=	JAVA=${JAVA}
 
 NO_ARCH=	yes
 
 # to rebuild the deps archive:
 #   1. set DEV_UPDATE_MODE=yes
 #   2. make makesum build
 #   3. upload the *-deps archive
 #   4. set DEV_UPDATE_MODE=no
 #   5. make clean makesum
 
 DEV_UPDATE_MODE=	no
 
-DEPS_CACHE_DIR= ${WRKDIR}
+DEPS_CACHE_DIR=		${WRKDIR}
 
 .if (${DEV_UPDATE_MODE} == "yes")
 post-build:
 	@cd ${DEPS_CACHE_DIR} && ${TAR} czf ${DISTDIR}/${PORTNAME}-${DISTVERSION}-deps${EXTRACT_SUFX} gradle-${PORTNAME}
 	@${ECHO} "(!!!) Please upload the deps archive: ${DISTDIR}/${PORTNAME}-${DISTVERSION}-deps${EXTRACT_SUFX}"
 .else
 MASTER_SITES+=	LOCAL/yuri/:deps
 DISTFILES+=	${PORTNAME}-${DISTVERSION}-deps${EXTRACT_SUFX}:deps
 GRADLE_ARGS=	--offline
 
 post-extract: # need a separate extract step because the cache is in /tmp, and not under work/ like with maven
 	@cd ${DEPS_CACHE_DIR} && ${TAR} xzf ${DISTDIR}/${PORTNAME}-${DISTVERSION}-deps${EXTRACT_SUFX}
 .endif
 
 BINARY_ALIAS=	git=false java=${JAVA}
 
 PLIST_FILES=	bin/jalview \
 		${DATADIR}/jalview.jar
 
 do-build:
 	@cd ${WRKSRC} && ${SETENV} ${MAKE_ENV} gradle \
 		--gradle-user-home ${DEPS_CACHE_DIR}/gradle-${PORTNAME} --project-cache-dir ${DEPS_CACHE_DIR}/gradle-${PORTNAME} \
 		${GRADLE_ARGS} --build-cache shadowJar
 
 do-install:
 	${INSTALL_SCRIPT} ${WRKDIR}/jalview.sh ${STAGEDIR}${PREFIX}/bin/jalview
 	@${MKDIR} ${STAGEDIR}${DATADIR}
 	${INSTALL_DATA} ${WRKSRC}/build/libs/jalview-all-${DISTVERSION}-j${JAVA_VERSION}.jar ${STAGEDIR}${DATADIR}/jalview.jar
 
 .include <bsd.port.mk>
diff --git a/biology/jalview/pkg-descr b/biology/jalview/pkg-descr
index 4fae9fde95ba..f8f1378b879d 100644
--- a/biology/jalview/pkg-descr
+++ b/biology/jalview/pkg-descr
@@ -1,25 +1,22 @@
 Jalview is a multiple alignment editor written in Java. It is used widely in a
 variety of web pages (e.g. the EBI Clustalw server and the Pfam protein domain
 database) and is also available as a general purpose alignment editor.
 
 o Reads and writes alignments in a variety of formats
 o Gaps can be inserted/deleted using the mouse.
 o Group editing (insertion deletion of gaps in groups of sequences).
 o Removal of gapped columns.
 o Align sequences using Web Services (Clustal, Muscle...)
 o Amino acid conservation analysis similar to that of AMAS.
 o Alignment sorting options (by name, tree order, percent identity, group).
 o UPGMA and NJ trees calculated and drawn based on percent identity distances.
 o Sequence clustering using principal component analysis.
 o Removal of redundant sequences.
 o Smith Waterman pairwise alignment of selected sequences.
 o Web based secondary structure prediction programs (JNet).
 o User predefined or custom colour schemes to colour alignments or groups.
 o Sequence feature retrieval and display on the alignment.
 o Print your alignment with colours and annotations.
 o Output alignments as HTML pages, images (PNG) or postscript (EPS).
 
-If you use Jalview in your work, please quote this publication. Clamp, M., et
-al. (2004), The Jalview Java Alignment Editor. Bioinformatics, 12, 426-7
-
 WWW: https://www.jalview.org