diff --git a/biology/py-loompy/Makefile b/biology/py-loompy/Makefile
index e69d6b660ee9..91a46f6a3428 100644
--- a/biology/py-loompy/Makefile
+++ b/biology/py-loompy/Makefile
@@ -1,23 +1,26 @@
 PORTNAME=	loompy
-DISTVERSION=	3.0.6
+DISTVERSION=	3.0.7
 CATEGORIES=	biology python
 MASTER_SITES=	CHEESESHOP
 PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
 
 MAINTAINER=	yuri@FreeBSD.org
 COMMENT=	Work with .loom files for single-cell RNA-seq data
 
 LICENSE=	BSD2CLAUSE
 LICENSE_FILE=	${WRKSRC}/LICENSE
 
 RUN_DEPENDS=	${PYNUMPY} \
+		${PYTHON_PKGNAMEPREFIX}click>0:devel/py-click@${PY_FLAVOR} \
 		${PYTHON_PKGNAMEPREFIX}h5py>0:science/py-h5py@${PY_FLAVOR} \
+		${PYTHON_PKGNAMEPREFIX}numba>0:devel/py-numba@${PY_FLAVOR} \
+		${PYTHON_PKGNAMEPREFIX}numpy-groupies>0:math/py-numpy-groupies@${PY_FLAVOR} \
 		${PYTHON_PKGNAMEPREFIX}pandas>0:math/py-pandas@${PY_FLAVOR} \
 		${PYTHON_PKGNAMEPREFIX}scipy>0:science/py-scipy@${PY_FLAVOR}
 
 USES=		python:3.7+
 USE_PYTHON=	distutils autoplist
 
 NO_ARCH=	yes
 
 .include <bsd.port.mk>
diff --git a/biology/py-loompy/distinfo b/biology/py-loompy/distinfo
index dad3edbc244a..633ef090896f 100644
--- a/biology/py-loompy/distinfo
+++ b/biology/py-loompy/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1592273431
-SHA256 (loompy-3.0.6.tar.gz) = 58e9763b8ab1af2a4a0e3805d120458b5184fd2b0f3031657ecce33c63ca4c46
-SIZE (loompy-3.0.6.tar.gz) = 41108
+TIMESTAMP = 1646583060
+SHA256 (loompy-3.0.7.tar.gz) = b5cdf7b54734c6bed3a181d11947af70af2c6e0dcadc02fd0e871df232faa8f4
+SIZE (loompy-3.0.7.tar.gz) = 4837617