diff --git a/math/py-dgl/Makefile b/math/py-dgl/Makefile
index d2f59de3d0bb..0d792c6f61c8 100644
--- a/math/py-dgl/Makefile
+++ b/math/py-dgl/Makefile
@@ -1,72 +1,76 @@
 PORTNAME=	dgl
-DISTVERSION=	1.1.2
-PORTREVISION=	4
+DISTVERSIONPREFIX=	v
+DISTVERSION=	2.4.0
 CATEGORIES=	math python # machine-learning
 PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
 
 MAINTAINER=	yuri@FreeBSD.org
 COMMENT=	Deep Graph Library
 WWW=		https://www.dgl.ai/
 
 LICENSE=	BSD3CLAUSE
 
 BUILD_DEPENDS=	${PY_SETUPTOOLS} \
 		${PYTHON_PKGNAMEPREFIX}wheel>0:devel/py-wheel@${PY_FLAVOR} \
 		${BACKEND_DEPENDS}
 LIB_DEPENDS=	libdgl.so:math/dgl
 RUN_DEPENDS=	${PYTHON_PKGNAMEPREFIX}networkx>=2.1:math/py-networkx@${PY_FLAVOR} \
 		${PYTHON_PKGNAMEPREFIX}numpy>=1.16:math/py-numpy@${PY_FLAVOR} \
 		${PYTHON_PKGNAMEPREFIX}psutil>=5.8.0:sysutils/py-psutil@${PY_FLAVOR} \
 		${PYTHON_PKGNAMEPREFIX}requests>=2.19.0:www/py-requests@${PY_FLAVOR} \
 		${PYTHON_PKGNAMEPREFIX}scipy>=1.1.0:science/py-scipy@${PY_FLAVOR} \
 		${PYTHON_PKGNAMEPREFIX}tqdm>0:misc/py-tqdm@${PY_FLAVOR} \
 		${BACKEND_DEPENDS}
 
 USES=		python localbase
 USE_PYTHON=	autoplist cython0 distutils
 
 WRKSRC_SUBDIR=	python
 
 USE_GITHUB=	yes
 GH_ACCOUNT=	dmlc
 
 MAKE_ENV=	DGL_LIBRARY_PATH=${LOCALBASE}/lib
 
 POST_PLIST=	fix-plist
 
 OPTIONS_RADIO=			BACKEND
 OPTIONS_RADIO_BACKEND=		PYTORCH TENSORFLOW
 OPTIONS_DEFAULT=		PYTORCH
 
 PYTORCH_DESC=			Use PyTorch backend
 PYTORCH_VARS=			BACKEND_DEPENDS=${PYTHON_PKGNAMEPREFIX}pytorch>0:misc/py-pytorch@${PY_FLAVOR}
 PYTORCH_MAKE_ENV=		DGLBACKEND=pytorch
 
 TENSORFLOW_DESC=		Use TensorFlow backend
 TENSORFLOW_VARS=		BACKEND_DEPENDS=${PYTHON_PKGNAMEPREFIX}tensorflow>0:science/py-tensorflow@${PY_FLAVOR}
 TENSORFLOW_MAKE_ENV=		DGLBACKEND=tensorflow
 
 post-install:
 	# workaround for https://github.com/dmlc/dgl/issues/5665
-	@${RM} ${STAGEDIR}${PREFIX}/dgl/libdgl.so
+	@${RM} -f ${STAGEDIR}${PREFIX}/dgl/libdgl.so
 	# remove empty dirs
-	@${RMDIR} \
+	@${RM} -rf \
 		${STAGEDIR}${PREFIX}/dgl/tensoradapter/pytorch \
 		${STAGEDIR}${PREFIX}/dgl/tensoradapter \
 		${STAGEDIR}${PREFIX}/dgl/dgl_sparse \
+		${STAGEDIR}${PREFIX}/dgl/graphbolt \
 		${STAGEDIR}${PREFIX}/dgl
 	# strip binaries
 	@${STRIP_CMD} ${STAGEDIR}${PYTHONPREFIX_SITELIBDIR}/dgl/_ffi/_cy3/core${PYTHON_TAG}.so
 
 fix-plist:
 	# workaround for https://github.com/dmlc/dgl/issues/5665
 	@${REINPLACE_CMD} ' \
-		/dgl\/libdgl.so/d ; \
+		/dgl\/libdgl\.so/d ; \
 		' ${TMPPLIST}
 	# remove empty dirs
 	@${REINPLACE_CMD} ' \
-		/dgl\/tensoradapter\/pytorch/d ; \
-		/dgl\/dgl_sparse/d ; \
+		/^dgl\/tensoradapter\/pytorch/d ; \
+		/^dgl\/tensoradapter$$/d ; \
+		/^dgl\/dgl_sparse/d ; \
+		/^dgl\/graphbolt/d ; \
+		/^dgl$$/d ; \
 		' ${TMPPLIST}
 
 .include <bsd.port.mk>
diff --git a/math/py-dgl/distinfo b/math/py-dgl/distinfo
index 63623e391919..d038080d9230 100644
--- a/math/py-dgl/distinfo
+++ b/math/py-dgl/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1716602658
-SHA256 (dmlc-dgl-1.1.2_GH0.tar.gz) = 5b7ef998d63946e8af29507318507915bc86a77d52d241414ef78eaca74a641a
-SIZE (dmlc-dgl-1.1.2_GH0.tar.gz) = 5613467
+TIMESTAMP = 1779000079
+SHA256 (dmlc-dgl-v2.4.0_GH0.tar.gz) = 6372d0c804b52940f2a4d0f9b9d83c422ec5ef933907b2805da08b409f8ed26c
+SIZE (dmlc-dgl-v2.4.0_GH0.tar.gz) = 7004674
diff --git a/math/py-dgl/files/patch-setup.py b/math/py-dgl/files/patch-setup.py
index 91c3c627d541..7db66e235046 100644
--- a/math/py-dgl/files/patch-setup.py
+++ b/math/py-dgl/files/patch-setup.py
@@ -1,20 +1,13 @@
---- setup.py.orig	2023-05-08 19:54:39 UTC
+-- Add FreeBSD support to get_lib_pattern function.
+-- FreeBSD uses .so files like Linux, so we add freebsd case.
+--- setup.py.orig	2024-08-29 00:00:00 UTC
 +++ setup.py
-@@ -49,6 +49,8 @@ def get_lib_path():
- def get_ta_lib_pattern():
-     if sys.platform.startswith("linux"):
-         ta_lib_pattern = "libtensoradapter_*.so"
-+    elif sys.platform.startswith("freebsd"):
-+        ta_lib_pattern = "libtensoradapter_*.so"
+@@ -42,6 +42,8 @@ def get_lib_pattern(lib_name):
+     lib_pattern = f"lib{lib_name}_*.so"
      elif sys.platform.startswith("darwin"):
-         ta_lib_pattern = "libtensoradapter_*.dylib"
-     elif sys.platform.startswith("win"):
-@@ -60,6 +62,8 @@ def get_ta_lib_pattern():
- 
- def get_dgl_sparse_pattern():
-     if sys.platform.startswith("linux"):
-+        dgl_sparse_lib_pattern = "libdgl_sparse_*.so"
+         lib_pattern = f"lib{lib_name}_*.dylib"
 +    elif sys.platform.startswith("freebsd"):
-         dgl_sparse_lib_pattern = "libdgl_sparse_*.so"
-     elif sys.platform.startswith("darwin"):
-         dgl_sparse_lib_pattern = "libdgl_sparse_*.dylib"
++        lib_pattern = f"lib{lib_name}_*.so"
+     elif sys.platform.startswith("win"):
+         lib_pattern = f"{lib_name}_*.dll"
+     else: