diff --git a/biology/biolibc-tools/Makefile b/biology/biolibc-tools/Makefile index f70c1f5b9930..670d37553f1b 100644 --- a/biology/biolibc-tools/Makefile +++ b/biology/biolibc-tools/Makefile @@ -1,28 +1,28 @@ PORTNAME= biolibc-tools -DISTVERSION= 0.1.4-6 -DISTVERSIONSUFFIX= -gb221258 +DISTVERSION= 0.1.4-9 +DISTVERSIONSUFFIX= -g6d96043 CATEGORIES= biology MAINTAINER= jwb@FreeBSD.org COMMENT= High-performance bioinformatics tools based on biolibc WWW= https://github.com/auerlab/biolibc-tools LICENSE= BSD2CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE BUILD_DEPENDS= uthash>0:devel/uthash LIB_DEPENDS= libbiolibc.so:biology/biolibc \ libxtend.so:devel/libxtend \ libxxhash.so:devel/xxhash USE_GITHUB= yes GH_ACCOUNT= auerlab MAKE_ENV= VERSION=${PORTVERSION} INSTALL_TARGET= install-strip pre-build: (cd ${WRKSRC} && ${MAKE} LOCALBASE=${LOCALBASE} depend) .include diff --git a/biology/biolibc-tools/distinfo b/biology/biolibc-tools/distinfo index 02b0171dd621..c6c721748e18 100644 --- a/biology/biolibc-tools/distinfo +++ b/biology/biolibc-tools/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1686344581 -SHA256 (auerlab-biolibc-tools-0.1.4-6-gb221258_GH0.tar.gz) = bd18e5354b13d75f066c2487914b7f577fe28f41c749fe99c45485365c700f4a -SIZE (auerlab-biolibc-tools-0.1.4-6-gb221258_GH0.tar.gz) = 29354 +TIMESTAMP = 1691169052 +SHA256 (auerlab-biolibc-tools-0.1.4-9-g6d96043_GH0.tar.gz) = 42f525268c22db49a894dcf98cd446af5745fa5ace9255e55566a9c9cdf800bd +SIZE (auerlab-biolibc-tools-0.1.4-9-g6d96043_GH0.tar.gz) = 29381 diff --git a/biology/biolibc-tools/pkg-plist b/biology/biolibc-tools/pkg-plist index 4325c450f37b..a59c9b6d3982 100644 --- a/biology/biolibc-tools/pkg-plist +++ b/biology/biolibc-tools/pkg-plist @@ -1,29 +1,29 @@ bin/blt libexec/biolibc-tools/chrom-lens libexec/biolibc-tools/deromanize libexec/biolibc-tools/ensemblid2gene libexec/biolibc-tools/extract-seq libexec/biolibc-tools/fasta2seq libexec/biolibc-tools/fastq-derep.sh libexec/biolibc-tools/fastx-derep libexec/biolibc-tools/fastx-stats libexec/biolibc-tools/fastx2tsv libexec/biolibc-tools/find-orfs -libexec/biolibc-tools/gff2bed +libexec/biolibc-tools/gff3-to-bed libexec/biolibc-tools/uniq-seqs.awk libexec/biolibc-tools/vcf-downsample libexec/biolibc-tools/vcf-search man/man1/blt-chrom-lens.1.gz man/man1/blt-deromanize.1.gz man/man1/blt-ensemblid2gene.1.gz man/man1/blt-extract-seq.1.gz man/man1/blt-fasta2seq.1.gz man/man1/blt-fastq-derep.sh.1.gz man/man1/blt-fastx-derep.1.gz man/man1/blt-fastx-stats.1.gz man/man1/blt-fastx2tsv.1.gz man/man1/blt-find-orfs.1.gz -man/man1/blt-gff2bed.1.gz +man/man1/blt-gff3-to-bed.1.gz man/man1/blt-vcf-downsample.1.gz man/man1/blt-vcf-search.1.gz man/man1/blt.1.gz