diff --git a/biology/wfa2-lib/Makefile b/biology/wfa2-lib/Makefile index cb334b9bf0c3..2300f379ec6f 100644 --- a/biology/wfa2-lib/Makefile +++ b/biology/wfa2-lib/Makefile @@ -1,20 +1,21 @@ PORTNAME= wfa2-lib DISTVERSIONPREFIX= v DISTVERSION= 2.3.2 +PORTREVISION= 1 CATEGORIES= biology MAINTAINER= jwb@FreeBSD.org COMMENT= Exact gap-affine algorithm using homology to accelerate alignment WWW= https://github.com/smarco/WFA2-lib LICENSE= MIT LICENSE_FILE= ${WRKSRC}/LICENSE USES= cmake pkgconfig USE_GITHUB= yes USE_LDCONFIG= yes GH_ACCOUNT= smarco GH_PROJECT= WFA2-lib .include diff --git a/biology/wfa2-lib/files/patch-CMakeLists.txt b/biology/wfa2-lib/files/patch-CMakeLists.txt new file mode 100644 index 000000000000..8b71ad656f0a --- /dev/null +++ b/biology/wfa2-lib/files/patch-CMakeLists.txt @@ -0,0 +1,11 @@ +--- CMakeLists.txt.orig 2023-01-31 15:02:27 UTC ++++ CMakeLists.txt +@@ -55,7 +55,7 @@ if(NOT CMAKE_BUILD_TYPE) + endif() + + if (${CMAKE_BUILD_TYPE} MATCHES Release) +- set(OPTIMIZE_FLAGS "${OPTIMIZE_FLAGS} -march=native -D_FILE_OFFSET_BITS=64") ++ set(OPTIMIZE_FLAGS "${OPTIMIZE_FLAGS} -D_FILE_OFFSET_BITS=64") + endif() + + if ((${CMAKE_BUILD_TYPE} MATCHES Release) OR (${CMAKE_BUILD_TYPE} MATCHES RelWithDebInfo))