diff --git a/biology/py-gtfparse/Makefile b/biology/py-gtfparse/Makefile index 00b52550618d..4bbf0abeb258 100644 --- a/biology/py-gtfparse/Makefile +++ b/biology/py-gtfparse/Makefile @@ -1,25 +1,24 @@ PORTNAME= gtfparse -DISTVERSION= 2.5.0 -PORTREVISION= 1 +DISTVERSION= 2.7.0 CATEGORIES= biology python MASTER_SITES= PYPI PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Parsing tools for GTF (gene transfer format) files WWW= https://github.com/openvax/gtfparse LICENSE= APACHE20 BUILD_DEPENDS= ${PY_SETUPTOOLS} \ ${PYTHON_PKGNAMEPREFIX}wheel>0:devel/py-wheel@${PY_FLAVOR} -RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}pandas>0:math/py-pandas@${PY_FLAVOR} \ +RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}pandas>=2.1.0:math/py-pandas@${PY_FLAVOR} \ ${PYTHON_PKGNAMEPREFIX}polars>=0.20.2:misc/py-polars@${PY_FLAVOR} \ - ${PYTHON_PKGNAMEPREFIX}pyarrow>=14.0.2:databases/py-pyarrow@${PY_FLAVOR} + ${PYTHON_PKGNAMEPREFIX}pyarrow>=18.0.0:databases/py-pyarrow@${PY_FLAVOR} USES= python USE_PYTHON= pep517 autoplist pytest # tests from the PYPI tarball fail because 'data' module is missing, and the GH repository doesn't have tags, see https://github.com/openvax/gtfparse/issues/53 NO_ARCH= yes .include diff --git a/biology/py-gtfparse/distinfo b/biology/py-gtfparse/distinfo index cf2b7fe4fe20..7ae95951e6c7 100644 --- a/biology/py-gtfparse/distinfo +++ b/biology/py-gtfparse/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1731429071 -SHA256 (gtfparse-2.5.0.tar.gz) = 9fea54811cd87f597a110a49dc1b1b6a3325ffb7d1f36ecc62c32d14d3eb9493 -SIZE (gtfparse-2.5.0.tar.gz) = 17228 +TIMESTAMP = 1778733842 +SHA256 (gtfparse-2.7.0.tar.gz) = a636b3952cebefa2b3d5a0639b3c59116c1ec6917658c78c7bb8483fdb69e0e3 +SIZE (gtfparse-2.7.0.tar.gz) = 24622